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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
16
DNA binding
2
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
November, 2018
3
January, 2019
1
March, 2020
1
October, 2017
Available data
18
bam
18
fastq
10
bed narrowPeak
10
bigWig
9
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
817
pancreas
744
liver
634
connective tissue
465
adipose tissue
433
epithelium
339
kidney
308
heart
216
brain
189
vasculature
183
blood vessel
159
bone element
127
artery
87
limb
75
musculature of body
69
blood
69
bodily fluid
61
eye
33
embryo
27
nerve
20
lung
19
spleen
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
19
AMP-T2D consortium
target.investigated_as!
broad histone mark
assay_title!
WGBS
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
16
1
1
1
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