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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
16
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
3
January, 2019
1
October, 2017
Available data
20
bam
20
fastq
12
bigWig
10
bed narrowPeak
9
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
867
pancreas
746
liver
635
connective tissue
480
epithelium
469
adipose tissue
337
kidney
313
heart
214
brain
190
vasculature
184
blood vessel
158
bone element
127
artery
88
limb
75
musculature of body
69
blood
69
bodily fluid
57
eye
33
embryo
27
nerve
20
spleen
19
lung
18
ureter
16
skeleton
13
vein
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
20
AMP
Genome assembly (visualization)
12
GRCh38
10
hg19
Lab
20
AMP-T2D consortium
target.investigated_as!
broad histone mark
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
16
2
1
1
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