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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
14
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
7
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
18
bam
18
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
688
liver
613
pancreas
605
connective tissue
459
adipose tissue
291
heart
277
epithelium
277
kidney
165
vasculature
160
blood vessel
158
bone element
121
artery
99
brain
73
limb
63
musculature of body
60
blood
60
bodily fluid
58
eye
25
embryo
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
19
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
14
2
1
1
1
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