Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
13
ATAC-seq
4
total RNA-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
14
DNA accessibility
14
DNA binding
4
Transcription
2
DNA methylation
Target of assay
8
control
6
histone
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
9
November, 2018
8
February, 2021
8
February, 2023
7
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
26
bam
18
fastq
16
bed narrowPeak
10
bigWig
7
bigBed narrowPeak
4
bed bed3
4
txt
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
35
Homo sapiens
Biosample type
35
tissue
Organ
795
pancreas
688
liver
606
connective tissue
459
adipose tissue
431
epithelium
324
kidney
291
heart
165
vasculature
160
blood vessel
159
bone element
121
artery
99
brain
73
limb
68
blood
68
bodily fluid
63
musculature of body
58
eye
25
embryo
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
7
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
35
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
35
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
35 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
14
1
2
1
1
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
pubis
1
1
+ See 8 more…
See all biosamples
Download