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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
11
ATAC-seq
9
DNase-seq
2
WGBS
1
FAIRE-seq
Assay category
DNA binding
58
Transcription
21
DNA accessibility
2
DNA methylation
Date released
60
February, 2021
9
July, 2019
6
October, 2019
5
June, 2019
1
March, 2020
Available data
81
bam
74
bigWig
69
tsv
56
bed narrowPeak
11
bed bed3+
10
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
81
Homo sapiens
Biosample type
60
cell line
14
tissue
7
primary cell
Organ
491
connective tissue
491
pancreas
405
adipose tissue
188
epithelium
171
liver
118
heart
92
kidney
83
vasculature
81
blood vessel
68
artery
66
bone element
49
limb
47
brain
40
musculature of body
18
ureter
14
embryo
8
skeleton
7
nerve
4
eye
4
spleen
3
vein
1
pericardium
0
thymus
Project
81
AMP
Genome assembly (visualization)
79
GRCh38
78
hg19
Lab
81
AMP-T2D consortium
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
81 results
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total RNA-seq
ATAC-seq
DNase-seq
WGBS
FAIRE-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
aorta
1
2
coronary artery
1
2
thoracic aorta
2
1
tibial artery
1
2
ascending aorta
1
1
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
smooth muscle cell of the coronary artery
1
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