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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
72
total RNA-seq
12
ATAC-seq
3
pCHi-C
Assay category
72
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
August, 2021
8
February, 2023
4
May, 2021
1
March, 2020
Available data
102
bam
88
txt
87
bigWig
73
tsv
fastq
22
bed narrowPeak
4
bed bed3
3
bed bed3+
Organism
171
Homo sapiens
Biosample type
160
tissue
8
cell line
2
in vitro differentiated cells
1
primary cell
Organ
583
connective tissue
475
pancreas
447
adipose tissue
393
heart
354
kidney
326
liver
267
epithelium
265
brain
230
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
61
eye
43
nerve
22
vein
20
lung
18
ureter
16
skeleton
10
embryo
9
blood
9
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
169
AMP
2
T1D
Genome assembly (visualization)
80
hg19
76
GRCh38
Lab
169
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
86
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
171 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
+ See 10 more…
cell line
H1-hESC
8
in vitro differentiated cells
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
primary cell
megakaryocyte
1
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