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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
11
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
40
DNA binding
13
DNA accessibility
1
3D chromatin structure
Target of assay
33
histone
33
histone modification
23
broad histone mark
10
narrow histone mark
7
control
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
5
March, 2020
3
February, 2020
1
May, 2021
Available data
53
bam
43
bigWig
41
bed narrowPeak
40
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
1
hic
1
tar
Organism
54
Homo sapiens
Biosample type
29
tissue
25
primary cell
Organ
116
brain
111
kidney
101
limb
55
epithelium
54
vasculature
52
blood vessel
43
heart
43
musculature of body
42
nerve
28
artery
28
eye
22
connective tissue
22
pancreas
21
vein
18
ureter
9
liver
4
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
0
thymus
Project
54
AMP
Genome assembly (visualization)
43
hg19
40
GRCh38
Lab
54
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
54 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial artery
23
2
1
coronary artery
2
ascending aorta
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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