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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
DNase-seq
13
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
51
DNA accessibility
13
DNA binding
6
Transcription
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
59
June, 2019
5
July, 2019
5
May, 2019
2
March, 2020
Available data
71
bam
71
bigWig
64
bed narrowPeak
64
bigBed narrowPeak
51
bed bed3+
51
bed broadPeak
51
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
71
Homo sapiens
Biosample type
60
tissue
11
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
71
AMP
Genome assembly (visualization)
91
hg19
71
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
BIOSAMPLE
ASSAY
71 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of leg
13
5
1
muscle of arm
17
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
+ See 4 more…
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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