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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
4
ATAC-seq
2
ChIP-seq
Assay category
24
DNA accessibility
2
DNA binding
Target of assay
5
RNA binding protein
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
19
June, 2019
3
August, 2017
1
February, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
424
bigWig
422
bam
398
tsv
26
bed narrowPeak
23
bigBed narrowPeak
21
bed broadPeak
20
bed bed3+
20
bigBed broadPeak
4
fastq
1
tagAlign
Organism
26
Homo sapiens
Biosample type
26
tissue
Organ
199
pancreas
138
brain
136
epithelium
112
liver
103
kidney
101
heart
92
limb
88
vasculature
85
blood vessel
60
musculature of body
51
connective tissue
34
artery
32
eye
27
nerve
18
ureter
13
vein
11
embryo
8
adipose tissue
8
bone element
8
skeleton
8
spleen
3
blood
3
bodily fluid
1
pituitary gland
Project
26
AMP
Genome assembly (visualization)
26
hg19
24
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
26 results
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DNase-seq
ATAC-seq
ChIP-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
omental fat pad
2
1
adipose tissue
1
1
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