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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
ChIP-seq
50
DNase-seq
1
FAIRE-seq
Assay category
164
DNA binding
51
DNA accessibility
Target of assay
161
histone
161
histone modification
105
narrow histone mark
56
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
75
October, 2019
64
November, 2017
48
June, 2019
25
May, 2019
October, 2017
2
November, 2018
1
July, 2019
Available data
252
bam
233
bigWig
215
bed narrowPeak
139
bigBed narrowPeak
104
tagAlign
62
bed broadPeak
56
bigBed broadPeak
53
bed bed3+
26
tsv
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
215
Homo sapiens
Biosample type
204
tissue
11
primary cell
Organ
441
liver
210
pancreas
197
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
74
artery
74
connective tissue
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
13
spleen
13
vein
12
adipose tissue
8
bone element
8
skeleton
1
pituitary gland
Project
215
AMP
Genome assembly (visualization)
213
GRCh38
153
hg19
Lab
215
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
October, 2017
BIOSAMPLE
ASSAY
215 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
5
14
layer of hippocampus
17
angular gyrus
14
caudate nucleus
12
1
temporal lobe
13
+ See 71 more…
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
brain pericyte
1
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