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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
DNase-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
51
DNA accessibility
3
DNA binding
Target of assay
histone
167
histone modification
106
narrow histone mark
61
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
48
June, 2019
3
November, 2017
2
November, 2018
1
July, 2019
Available data
95
bam
74
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
53
bed bed3+
53
bed broadPeak
53
bigBed broadPeak
26
tsv
19
tagAlign
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
54
Homo sapiens
Biosample type
46
tissue
8
primary cell
Organ
361
liver
153
kidney
94
heart
87
pancreas
67
vasculature
64
blood vessel
63
epithelium
54
artery
53
blood
53
bodily fluid
44
limb
40
connective tissue
36
brain
33
musculature of body
32
eye
18
ureter
11
adipose tissue
8
bone element
8
skeleton
8
spleen
3
embryo
3
nerve
3
vein
Project
54
AMP
Genome assembly (visualization)
53
GRCh38
44
hg19
Lab
54
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
54 results
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DNase-seq
ChIP-seq
FAIRE-seq
tissue
brain
14
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
frontal cortex
2
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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