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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
21
DNase-seq
5
total RNA-seq
2
ATAC-seq
2
WGBS
1
pCHi-C
Assay category
55
DNA binding
23
DNA accessibility
5
Transcription
2
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
42
October, 2019
18
June, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
February, 2020
1
March, 2020
1
October, 2017
Available data
84
bam
65
bigWig
59
bed narrowPeak
57
bigBed narrowPeak
24
fastq
21
bed bed3+
21
bed broadPeak
21
bigBed broadPeak
6
tsv
2
bed bedMethyl
2
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
86
tissue
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
230
blood vessel
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
86
AMP
Genome assembly (visualization)
65
GRCh38
63
hg19
Lab
86
AMP-T2D consortium
organ_slims!
bone element
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
pCHi-C
tissue
tibial nerve
35
2
5
1
spleen
20
1
1
2
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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