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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
170
ChIP-seq
29
DNase-seq
25
ATAC-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
Hi-C
3
small RNA-seq
2
Capture-C
1
FAIRE-seq
1
RNA microarray
1
RRBS
Assay category
29
DNA accessibility
Date released
24
June, 2019
2
October, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
29
bam
29
bed broadPeak
29
bed narrowPeak
29
bigBed broadPeak
29
bigBed narrowPeak
29
bigWig
28
bed bed3+
2
fastq
Organism
29
Homo sapiens
Biosample type
20
tissue
8
primary cell
1
in vitro differentiated cells
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
29
AMP
Genome assembly (visualization)
29
GRCh38
28
hg19
Lab
29
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
29 results
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DNase-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
omental fat pad
2
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
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