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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
18
DNase-seq
14
total RNA-seq
1
GRO-seq
Assay category
18
DNA accessibility
14
Transcription
Date released
18
June, 2019
8
August, 2021
4
February, 2018
2
May, 2021
1
January, 2018
Available data
33
bigWig
32
bam
18
bed bed3+
18
bed broadPeak
18
bed narrowPeak
18
bigBed broadPeak
18
bigBed narrowPeak
14
tsv
5
fastq
Organism
33
Homo sapiens
Biosample type
18
tissue
8
cell line
7
in vitro differentiated cells
Organ
728
pancreas
531
connective tissue
418
adipose tissue
395
epithelium
302
kidney
259
heart
239
liver
159
bone element
134
vasculature
131
blood vessel
107
artery
68
brain
57
musculature of body
56
eye
56
limb
20
lung
18
ureter
16
skeleton
15
embryo
9
blood
9
bodily fluid
8
nerve
5
spleen
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
33
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
1
hg18
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
33 results
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Clear Filters
DNase-seq
total RNA-seq
GRO-seq
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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