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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
18
DNase-seq
1
GRO-seq
Assay category
18
DNA accessibility
18
DNA binding
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Date released
18
June, 2019
9
December, 2017
9
February, 2018
1
January, 2018
Available data
50
bam
45
bigWig
30
bed narrowPeak
23
fastq
21
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
18
bigBed narrowPeak
tsv
Organism
37
Homo sapiens
Biosample type
19
in vitro differentiated cells
18
tissue
Organ
617
liver
529
pancreas
epithelium
330
kidney
260
brain
225
heart
206
connective tissue
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
37
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
1
hg18
Lab
37
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
tsv
organ_slims!
epithelium
BIOSAMPLE
ASSAY
37 results
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Clear Filters
ChIP-seq
DNase-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
18
1
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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