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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
14
ChIP-seq
14
total RNA-seq
1
GRO-seq
Assay category
18
DNA accessibility
14
DNA binding
14
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
Date released
18
June, 2019
10
February, 2018
8
August, 2021
8
December, 2017
2
May, 2021
1
January, 2018
Available data
54
bam
47
bigWig
32
bed narrowPeak
27
fastq
21
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
18
bigBed narrowPeak
14
tsv
Organism
47
Homo sapiens
Biosample type
21
in vitro differentiated cells
18
tissue
8
cell line
Organ
623
pancreas
622
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
223
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
47
AMP
Genome assembly (visualization)
46
GRCh38
46
hg19
1
hg18
Lab
47
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
BIOSAMPLE
ASSAY
47 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
12
4
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
cell line
H1-hESC
8
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