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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
54
DNase-seq
8
ATAC-seq
7
total RNA-seq
Assay category
66
DNA binding
62
DNA accessibility
7
Transcription
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
69
October, 2019
50
June, 2019
7
May, 2019
6
February, 2021
July, 2019
3
February, 2020
Available data
131
bam
110
bed narrowPeak
108
bigWig
102
bigBed narrowPeak
54
bed bed3+
54
bed broadPeak
54
bigBed broadPeak
7
tsv
Organism
135
Homo sapiens
Biosample type
135
tissue
Organ
932
pancreas
781
liver
665
connective tissue
510
epithelium
478
adipose tissue
368
heart
343
kidney
268
brain
224
vasculature
219
blood vessel
159
bone element
138
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
19
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
135
AMP
Genome assembly (visualization)
114
hg19
113
GRCh38
Lab
135
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
BIOSAMPLE
ASSAY
135 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of leg
7
13
muscle of arm
17
renal pelvis
10
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