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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
DNase-seq
2
total RNA-seq
1
FAIRE-seq
1
RRBS
Assay category
DNA binding
7
DNA accessibility
3D chromatin structure
2
Transcription
1
DNA methylation
Date released
4
June, 2019
3
July, 2019
3
October, 2019
Available data
9
bam
9
bigWig
7
bed narrowPeak
7
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
10
Homo sapiens
Biosample type
60
cell line
59
tissue
10
primary cell
Organ
307
epithelium
273
pancreas
26
connective tissue
21
kidney
10
vasculature
9
brain
9
liver
8
blood
8
bodily fluid
8
heart
7
blood vessel
4
musculature of body
3
vein
2
adipose tissue
2
artery
2
eye
1
bone element
1
bone marrow
1
pericardium
Project
10
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
3D chromatin structure
BIOSAMPLE
ASSAY
10 results
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DNase-seq
total RNA-seq
FAIRE-seq
RRBS
primary cell
endothelial cell of umbilical vein
2
1
choroid plexus epithelial cell
1
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
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