Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
7
DNase-seq
1
ATAC-seq
FAIRE-seq
Assay category
50
DNA binding
8
DNA accessibility
Target of assay
46
histone
46
histone modification
27
broad histone mark
19
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
36
May, 2019
12
October, 2019
5
June, 2019
4
November, 2017
1
July, 2019
Available data
82
bam
69
bigWig
58
bed narrowPeak
57
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
10
tsv
9
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
Organism
58
Homo sapiens
Biosample type
38
tissue
20
primary cell
Organ
441
liver
212
pancreas
202
brain
191
heart
182
kidney
150
epithelium
132
vasculature
128
blood vessel
92
limb
75
connective tissue
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
12
vein
8
bone element
8
skeleton
1
pituitary gland
Project
58
AMP
Genome assembly (visualization)
58
GRCh38
57
hg19
Lab
58
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
FAIRE-seq
organ_slims!
artery
BIOSAMPLE
ASSAY
58 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
tissue
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
Download