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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
9
DNase-seq
Assay category
61
DNA binding
9
DNA accessibility
Target of assay
56
histone
56
histone modification
36
broad histone mark
20
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
39
May, 2019
20
October, 2019
7
June, 2019
4
November, 2017
Available data
165
bam
140
bigWig
120
bed narrowPeak
70
bigBed narrowPeak
67
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
hdf5
1
bedpe bed3+
1
hic
Organism
70
Homo sapiens
Biosample type
62
tissue
8
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
vein
10
adipose tissue
6
eye
Project
70
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
70
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
vein
spinal cord
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
DNase-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
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