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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
535
total RNA-seq
255
ChIP-seq
71
ATAC-seq
20
DNase-seq
10
single cell RNA-seq
8
WGBS
6
Hi-C
6
pCHi-C
3
small RNA-seq
2
Capture-C
2
RRBS
1
FAIRE-seq
1
RNA microarray
Assay category
20
DNA accessibility
Date released
13
June, 2019
4
October, 2019
1
August, 2017
1
November, 2018
1
November, 2020
Available data
20
bam
20
bed broadPeak
20
bed narrowPeak
20
bigBed broadPeak
20
bigBed narrowPeak
20
bigWig
19
bed bed3+
2
fastq
Organism
20
Homo sapiens
Biosample type
12
primary cell
7
tissue
1
in vitro differentiated cells
Organ
81
kidney
36
limb
33
musculature of body
32
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
9
connective tissue
8
pancreas
6
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
18
hg19
Lab
20
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
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DNase-seq
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
+ See 4 more…
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
ascending aorta
1
in vitro differentiated cells
adipocyte
1
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