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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
6
DNase-seq
2
total RNA-seq
Assay category
14
DNA binding
6
DNA accessibility
2
Transcription
Target of assay
12
histone
12
histone modification
7
narrow histone mark
5
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
12
October, 2019
4
June, 2019
4
November, 2017
2
July, 2019
Available data
22
bam
22
bigWig
20
bed narrowPeak
20
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
6
bed bed3+
4
fastq
2
tsv
Organism
22
Homo sapiens
Biosample type
105
tissue
64
cell line
22
primary cell
Organ
225
epithelium
192
pancreas
32
connective tissue
28
kidney
22
vasculature
18
blood vessel
14
brain
12
vein
11
liver
11
musculature of body
10
heart
3
eye
2
adipose tissue
2
artery
1
pericardium
Project
22
AMP
Genome assembly (visualization)
27
hg19
22
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
endothelial cell of coronary artery
1
kidney capillary endothelial cell
1
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