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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
5
DNase-seq
4
total RNA-seq
3
ATAC-seq
1
WGBS
Assay category
57
DNA binding
8
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
39
May, 2019
21
October, 2019
6
July, 2019
3
June, 2019
1
March, 2020
Available data
100
bed narrowPeak
87
bam
70
bigWig
62
bigBed narrowPeak
14
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
70
Homo sapiens
Biosample type
70
tissue
56
cell line
29
primary cell
Organ
481
connective tissue
423
adipose tissue
373
pancreas
265
liver
202
brain
117
heart
91
kidney
91
limb
70
blood vessel
70
vasculature
58
bone element
57
musculature of body
31
nerve
27
artery
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
70
GRCh38
69
hg19
Lab
70
AMP-T2D consortium
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial artery
18
2
1
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
coronary artery
3
2
1
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