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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
DNase-seq
2
Hi-C
Assay category
6
DNA accessibility
2
3D chromatin structure
Date released
4
June, 2019
2
July, 2019
2
October, 2019
Available data
32
bam
29
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
8
bed bed3+
6
fastq
2
hdf5
2
hic
2
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
Organism
8
Homo sapiens
Biosample type
8
primary cell
5
tissue
Organ
21
epithelium
10
kidney
8
brain
8
connective tissue
8
vasculature
6
blood vessel
6
liver
3
heart
2
vein
1
eye
1
musculature of body
Project
8
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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