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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
2
Hi-C
1
FAIRE-seq
Assay category
DNA binding
12
DNA accessibility
2
3D chromatin structure
Date released
7
June, 2019
5
October, 2019
2
July, 2019
Available data
83
bam
76
bigWig
68
tsv
58
bed narrowPeak
13
bed bed3+
12
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
9
primary cell
5
tissue
Organ
80
kidney
42
epithelium
36
brain
36
limb
34
musculature of body
33
pancreas
30
heart
21
connective tissue
18
ureter
14
vasculature
12
blood vessel
8
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
14 results
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DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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