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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
Hi-C
1
RRBS
1
WGBS
Assay category
6
DNA binding
2
3D chromatin structure
2
DNA methylation
Target of assay
2
RNA binding protein
2
control
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
6
November, 2017
2
July, 2019
2
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
10
Homo sapiens
Biosample type
8
primary cell
2
tissue
Organ
480
pancreas
468
liver
268
epithelium
102
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
23
brain
11
heart
10
vasculature
6
blood vessel
6
musculature of body
4
kidney
1
eye
1
limb
1
pericardium
1
vein
Project
10
AMP
Genome assembly (visualization)
9
hg19
5
GRCh38
Lab
10
AMP-T2D consortium
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
Hi-C
RRBS
WGBS
primary cell
choroid plexus epithelial cell
3
1
brain microvascular endothelial cell
3
endothelial cell of umbilical vein
1
tissue
aorta
1
1
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