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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
6
single cell RNA-seq
2
Hi-C
1
pCHi-C
Assay category
15
Transcription
2
3D chromatin structure
Date released
February, 2021
6
August, 2021
5
July, 2019
4
March, 2020
3
February, 2020
Available data
121
bed narrowPeak
119
bam
99
bigWig
83
bigBed narrowPeak
17
bed broadPeak
17
bigBed broadPeak
16
tsv
13
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
18
Homo sapiens
Biosample type
15
tissue
3
primary cell
Organ
392
pancreas
176
liver
129
epithelium
119
heart
30
connective tissue
26
brain
18
blood vessel
18
vasculature
16
adipose tissue
16
kidney
14
embryo
11
musculature of body
7
limb
6
artery
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
18
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
18
AMP-T2D consortium
month_released!
February, 2021
BIOSAMPLE
ASSAY
18 results
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total RNA-seq
single cell RNA-seq
Hi-C
pCHi-C
tissue
aorta
1
4
1
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
+ See 1 more…
primary cell
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
smooth muscle cell of the coronary artery
1
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