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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
single cell RNA-seq
2
Hi-C
1
pCHi-C
Assay category
9
Transcription
2
3D chromatin structure
Date released
4
August, 2021
4
March, 2020
3
July, 2019
1
February, 2020
Available data
83
bam
70
bigWig
59
bed narrowPeak
58
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
10
tsv
9
bed bed3+
6
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
12
Homo sapiens
Biosample type
11
tissue
1
primary cell
Organ
479
connective tissue
424
pancreas
402
adipose tissue
176
liver
171
heart
161
epithelium
70
blood vessel
70
vasculature
artery
58
bone element
26
brain
24
kidney
14
embryo
11
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
12
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
12
AMP-T2D consortium
organ_slims!
artery
BIOSAMPLE
ASSAY
12 results
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Clear Filters
total RNA-seq
single cell RNA-seq
Hi-C
pCHi-C
tissue
aorta
1
4
1
1
ascending aorta
2
thoracic aorta
2
primary cell
endothelial cell of umbilical vein
1
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