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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
total RNA-seq
6
single cell RNA-seq
2
Hi-C
1
pCHi-C
Assay category
72
Transcription
2
3D chromatin structure
Date released
52
February, 2021
6
August, 2021
5
July, 2019
4
February, 2020
4
February, 2023
4
March, 2020
Available data
192
bam
166
bed narrowPeak
161
bigWig
89
bigBed narrowPeak
73
tsv
21
bed broadPeak
21
bigBed broadPeak
17
bed bed3+
6
fastq
6
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
75
Homo sapiens
Biosample type
52
cell line
20
tissue
3
primary cell
Organ
479
connective tissue
424
pancreas
402
adipose tissue
176
liver
171
heart
161
epithelium
70
blood vessel
70
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
11
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
75
AMP
Genome assembly (visualization)
60
hg19
58
GRCh38
Lab
75
AMP-T2D consortium
BIOSAMPLE
ASSAY
75 results
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total RNA-seq
single cell RNA-seq
Hi-C
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
1
retina
3
ascending aorta
2
pigmented layer of retina
2
pulmonary artery
2
+ See 3 more…
primary cell
endothelial cell of coronary artery
1
endothelial cell of umbilical vein
1
smooth muscle cell of the coronary artery
1
See all biosamples
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