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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ChIP-seq
6
DNase-seq
1
Hi-C
Assay category
57
DNA binding
6
DNA accessibility
1
3D chromatin structure
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
39
May, 2019
20
October, 2019
4
June, 2019
1
March, 2020
Available data
155
bam
128
bigWig
113
bed narrowPeak
67
tsv
63
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
64
Homo sapiens
Biosample type
63
tissue
1
primary cell
Organ
360
liver
127
brain
104
kidney
98
pancreas
97
heart
85
vasculature
84
limb
81
blood vessel
epithelium
54
blood
54
bodily fluid
49
musculature of body
29
connective tissue
26
nerve
25
artery
18
ureter
14
vein
13
spleen
11
adipose tissue
6
eye
Project
64
AMP
Genome assembly (visualization)
64
hg19
63
GRCh38
Lab
64
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
DNase-seq
Hi-C
tissue
tibial artery
18
2
ascending aorta
13
1
aorta
11
1
thoracic aorta
12
coronary artery
3
2
primary cell
smooth muscle cell of the brain vasculature
1
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