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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
10
DNase-seq
1
FAIRE-seq
Assay category
71
DNA binding
11
DNA accessibility
Target of assay
66
histone
66
histone modification
41
broad histone mark
25
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
39
May, 2019
33
October, 2019
6
June, 2019
4
November, 2017
Available data
184
bam
154
bigWig
132
bed narrowPeak
82
bigBed narrowPeak
68
tsv
16
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
82
Homo sapiens
Biosample type
62
tissue
20
primary cell
Organ
358
liver
127
brain
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
82
AMP
Genome assembly (visualization)
82
hg19
81
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
82 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
smooth muscle cell of the brain vasculature
1
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