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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
ChIP-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
67
Transcription
6
DNA binding
Target of assay
4
transcription factor
2
control
Date released
58
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
2
March, 2020
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
74
Homo sapiens
Biosample type
58
cell line
14
tissue
2
primary cell
Organ
500
connective tissue
436
pancreas
409
adipose tissue
260
liver
174
heart
163
epithelium
144
brain
74
blood vessel
74
vasculature
64
artery
58
bone element
24
kidney
24
musculature of body
14
embryo
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
74
AMP
Genome assembly (visualization)
62
GRCh38
62
hg19
Lab
74
AMP-T2D consortium
BIOSAMPLE
ASSAY
74 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
6
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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