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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
6
single cell RNA-seq
2
ChIP-seq
1
pCHi-C
Assay category
67
Transcription
2
DNA binding
Target of assay
transcription factor
2
control
Date released
54
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
2
March, 2020
Available data
176
bam
146
bigWig
124
bed narrowPeak
78
bigBed narrowPeak
68
tsv
15
bed broadPeak
15
bigBed broadPeak
13
bed bed3+
4
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
2
tagAlign
1
tar
Organism
70
Homo sapiens
Biosample type
54
cell line
14
tissue
2
primary cell
Organ
500
connective tissue
435
pancreas
409
adipose tissue
260
liver
170
heart
162
epithelium
144
brain
70
blood vessel
70
vasculature
60
artery
58
bone element
24
kidney
24
musculature of body
14
embryo
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
70
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
single cell RNA-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
2
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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