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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
1
RRBS
Assay category
3
DNA binding
2
DNA accessibility
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
1
July, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
945
pancreas
790
liver
682
connective tissue
524
epithelium
489
adipose tissue
354
kidney
350
heart
274
brain
233
vasculature
blood vessel
159
bone element
139
artery
119
limb
94
musculature of body
69
blood
69
bodily fluid
60
eye
42
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2020
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
DNase-seq
RRBS
primary cell
choroid plexus epithelial cell
3
1
1
smooth muscle cell of the brain vasculature
1
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