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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
8
ATAC-seq
6
ChIP-seq
2
Hi-C
1
pCHi-C
Assay category
53
Transcription
8
DNA accessibility
6
DNA binding
2
3D chromatin structure
Target of assay
4
transcription factor
2
control
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
67
bam
57
bigWig
54
tsv
12
bed narrowPeak
6
tagAlign
2
bedpe bed3+
2
hic
Organism
70
Homo sapiens
Biosample type
66
cell line
3
tissue
1
primary cell
Organ
457
connective tissue
387
adipose tissue
150
bone element
73
heart
70
blood vessel
70
vasculature
66
artery
46
pancreas
38
epithelium
10
kidney
8
skeleton
6
limb
6
liver
5
musculature of body
2
brain
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
70
AMP
Genome assembly (visualization)
67
hg19
65
GRCh38
Lab
70
AMP-T2D consortium
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
aorta
1
1
1
primary cell
endothelial cell of umbilical vein
1
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