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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
39
DNase-seq
1
FAIRE-seq
Assay category
132
DNA binding
40
DNA accessibility
Target of assay
120
histone
120
histone modification
75
broad histone mark
45
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
51
May, 2019
46
April, 2019
38
June, 2019
33
October, 2019
4
November, 2017
Available data
320
bam
315
bigWig
271
bed narrowPeak
181
tsv
172
bigBed narrowPeak
45
bed broadPeak
45
bigBed broadPeak
41
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
fastq
6
hic
6
tagAlign
5
bedpe bed3+
2
hdf5
1
tar
Organism
172
Homo sapiens
Biosample type
145
tissue
27
primary cell
Organ
358
liver
127
brain
104
kidney
94
heart
91
pancreas
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
47
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
172
AMP
Genome assembly (visualization)
171
GRCh38
168
hg19
Lab
172
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
172 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
heart left ventricle
28
3
heart
7
18
tibial artery
18
2
ascending aorta
13
1
heart right ventricle
11
1
+ See 6 more…
primary cell
endothelial cell of umbilical vein
10
2
1
cardiac fibroblast
3
3
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
kidney capillary endothelial cell
1
+ See 1 more…
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