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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
Assay category
122
DNA binding
67
Transcription
61
DNA accessibility
4
3D chromatin structure
3
DNA methylation
Target of assay
60
transcription factor
39
histone
39
histone modification
22
broad histone mark
21
control
17
narrow histone mark
15
RNA binding protein
10
chromatin remodeller
Date released
50
May, 2019
October, 2019
27
December, 2018
18
January, 2019
15
November, 2018
6
February, 2021
6
November, 2017
Available data
122
bam
103
bigWig
101
bed narrowPeak
97
bigBed narrowPeak
66
fastq
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
122
Homo sapiens
Biosample type
66
cell line
50
tissue
6
primary cell
Organ
547
liver
205
pancreas
152
connective tissue
134
brain
129
heart
105
epithelium
73
adipose tissue
62
vasculature
60
blood
60
bodily fluid
59
blood vessel
39
musculature of body
31
kidney
22
embryo
20
spleen
11
artery
7
limb
3
eye
Project
122
AMP
Genome assembly (visualization)
103
hg19
101
GRCh38
Lab
122
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
October, 2019
BIOSAMPLE
ASSAY
122 results
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ChIP-seq
cell line
GM12878
60
smooth muscle cell of the coronary artery
6
tissue
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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