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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
DNase-seq
2
Hi-C
1
snATAC-seq
Assay category
45
DNA accessibility
2
3D chromatin structure
Date released
40
June, 2019
4
October, 2019
2
July, 2019
1
May, 2022
Available data
242
bam
223
bigWig
193
bed narrowPeak
130
bigBed narrowPeak
77
tsv
63
bed broadPeak
50
bigBed broadPeak
47
bed bed3+
21
tagAlign
8
fastq
6
bed bedMethyl
6
bigBed bedMethyl
5
hic
4
bedpe bed3+
2
hdf5
1
tar
1
txt
Organism
47
Homo sapiens
Biosample type
38
tissue
9
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
47
AMP
Genome assembly (visualization)
46
hg19
44
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
47 results
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DNase-seq
Hi-C
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
coronary artery
2
tibial artery
2
ascending aorta
1
+ See 3 more…
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 2 more…
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