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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
Assay category
83
DNA binding
Target of assay
83
histone
83
histone modification
49
broad histone mark
34
narrow histone mark
29
control
12
transcription factor
5
RNA binding protein
Date released
36
May, 2019
33
October, 2019
6
December, 2017
6
February, 2018
2
November, 2017
Available data
83
bam
79
bigWig
77
bed narrowPeak
66
bigBed narrowPeak
14
fastq
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
Organism
83
Homo sapiens
Biosample type
54
tissue
17
primary cell
12
in vitro differentiated cells
Organ
187
brain
151
pancreas
102
liver
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
83
AMP
Genome assembly (visualization)
79
hg19
77
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
83 results
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ChIP-seq
tissue
tibial artery
18
ascending aorta
12
aorta
11
thoracic aorta
11
coronary artery
2
primary cell
endothelial cell of umbilical vein
15
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
in vitro differentiated cells
pancreatic endoderm
10
Hepatic endoderm
2
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