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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
3
DNase-seq
2
WGBS
1
ATAC-seq
1
FAIRE-seq
1
pCHi-C
Assay category
37
DNA binding
5
DNA accessibility
2
DNA methylation
Target of assay
21
histone
21
histone modification
13
broad histone mark
10
control
8
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
20
October, 2019
9
November, 2018
7
December, 2018
7
January, 2019
1
March, 2020
1
October, 2017
Available data
44
bam
31
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
24
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
hic
1
bedpe bed3+
1
tar
1
tsv
Organism
45
Homo sapiens
Biosample type
25
tissue
20
primary cell
Organ
939
pancreas
789
liver
684
connective tissue
518
epithelium
491
adipose tissue
353
kidney
350
heart
286
brain
233
vasculature
227
blood vessel
159
bone element
141
artery
122
limb
94
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
45
AMP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
45
AMP-T2D consortium
files.file_type!
hic
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
pCHi-C
tissue
spleen
20
1
2
1
1
primary cell
endothelial cell of umbilical vein
17
2
1
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