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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
4
DNase-seq
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
52
DNA binding
6
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
39
histone
39
histone modification
25
broad histone mark
14
narrow histone mark
13
control
Date released
63
October, 2019
1
February, 2020
1
March, 2020
Available data
62
bam
46
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
bed bed3+
4
tsv
1
hic
1
tar
Organism
63
Homo sapiens
Biosample type
42
tissue
21
primary cell
Organ
86
brain
69
limb
47
blood vessel
47
vasculature
42
nerve
35
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
7
liver
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
63
AMP
Genome assembly (visualization)
47
hg19
43
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
FAIRE-seq
Hi-C
tissue
tibial nerve
35
2
4
1
primary cell
endothelial cell of umbilical vein
17
2
1
1
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