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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
1
RRBS
Assay category
3
DNA binding
2
DNA accessibility
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
3
November, 2017
2
June, 2019
1
July, 2019
Available data
5
bam
5
bigWig
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
3
fastq
2
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
946
pancreas
791
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
354
kidney
286
brain
236
vasculature
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
6
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
DNase-seq
RRBS
primary cell
choroid plexus epithelial cell
3
1
1
smooth muscle cell of the brain vasculature
1
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