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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
3
Hi-C
Assay category
34
DNA accessibility
3
3D chromatin structure
Date released
30
June, 2019
3
July, 2019
2
November, 2018
2
October, 2019
Available data
263
bam
237
bigWig
216
bed narrowPeak
140
bigBed narrowPeak
118
tagAlign
51
bed broadPeak
42
bigBed broadPeak
37
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bed bed3
1
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
37
Homo sapiens
Biosample type
27
tissue
10
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
37
AMP
Genome assembly (visualization)
34
GRCh38
27
hg19
Lab
37
AMP-T2D consortium
BIOSAMPLE
ASSAY
37 results
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DNase-seq
Hi-C
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
endothelial cell of umbilical vein
2
astrocyte of the hippocampus
1
+ See 1 more…
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