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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
Assay category
14
Transcription
Date released
8
August, 2021
4
February, 2018
2
May, 2021
Available data
56
bam
44
bigWig
27
bed narrowPeak
27
fastq
14
tsv
13
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
14
Homo sapiens
Biosample type
8
cell line
6
in vitro differentiated cells
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
0
vein
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
esophagus
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
cell line
H1-hESC
8
in vitro differentiated cells
pancreatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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