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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
total RNA-seq
1
DNase-seq
Assay category
4
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Date released
4
December, 2017
2
May, 2021
1
June, 2019
Available data
7
bam
5
bigWig
4
fastq
3
bed narrowPeak
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
7
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
tissue
Organ
91
epithelium
84
bone element
81
pancreas
23
kidney
19
connective tissue
9
musculature of body
6
embryo
6
heart
3
brain
1
adipose tissue
1
limb
1
liver
1
stomach
1
urinary bladder
1
vasculature
0
vein
Project
7
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
7
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
1
audit script error
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
7 results
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ChIP-seq
total RNA-seq
DNase-seq
in vitro differentiated cells
Hepatic endoderm
4
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
tissue
muscle of leg
1
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