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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
5
total RNA-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
50
DNA binding
5
Transcription
2
3D chromatin structure
2
DNA accessibility
Target of assay
37
histone
37
histone modification
23
broad histone mark
14
narrow histone mark
13
control
Date released
57
October, 2019
1
February, 2020
1
March, 2020
Available data
62
bam
46
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
bed broadPeak
6
bigBed broadPeak
5
tsv
4
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
59
Homo sapiens
Biosample type
41
tissue
18
primary cell
Organ
925
pancreas
728
liver
674
connective tissue
502
epithelium
488
adipose tissue
323
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
59
AMP
Genome assembly (visualization)
42
hg19
39
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
ATAC-seq
FAIRE-seq
tissue
tibial nerve
35
5
1
primary cell
endothelial cell of umbilical vein
15
2
1
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