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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
ChIP-seq
4
DNase-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
52
DNA binding
6
DNA accessibility
2
3D chromatin structure
Target of assay
39
histone
39
histone modification
25
broad histone mark
14
narrow histone mark
13
control
Date released
59
October, 2019
1
March, 2020
Available data
62
bam
46
bigWig
40
bed narrowPeak
39
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
tsv
4
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
60
Homo sapiens
Biosample type
38
tissue
22
primary cell
Organ
617
liver
529
pancreas
368
epithelium
330
kidney
260
brain
206
connective tissue
185
heart
168
vasculature
162
blood vessel
115
limb
101
bone element
90
adipose tissue
87
musculature of body
83
artery
69
blood
69
bodily fluid
56
eye
38
nerve
24
spleen
23
embryo
22
vein
19
lung
18
ureter
16
skeleton
4
gonad
4
ovary
2
pituitary gland
1
bone marrow
1
lymph node
1
pericardium
1
skin of body
1
thymus
Project
60
AMP
Genome assembly (visualization)
44
hg19
39
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
tsv
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
ATAC-seq
FAIRE-seq
tissue
tibial nerve
35
2
1
primary cell
endothelial cell of umbilical vein
17
2
2
1
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