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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
Hi-C
1
ATAC-seq
1
FAIRE-seq
Assay category
16
DNA binding
2
3D chromatin structure
2
DNA accessibility
Target of assay
14
histone
14
histone modification
7
broad histone mark
7
narrow histone mark
2
control
Date released
19
October, 2019
1
March, 2020
Available data
21
bam
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tagAlign
1
tar
Organism
20
Homo sapiens
Biosample type
18
primary cell
2
tissue
Organ
925
pancreas
728
liver
674
connective tissue
502
epithelium
488
adipose tissue
323
heart
276
kidney
239
brain
219
vasculature
217
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
57
eye
50
musculature of body
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
14
hg19
11
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
Hi-C
ATAC-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
15
2
1
tissue
islet of Langerhans
1
pituitary gland
1
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