Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
2
Hi-C
1
RRBS
1
total RNA-seq
Assay category
7
DNA binding
2
3D chromatin structure
1
DNA methylation
1
Transcription
Target of assay
5
histone
5
histone modification
4
broad histone mark
2
control
1
narrow histone mark
Date released
8
October, 2019
2
July, 2019
1
March, 2020
Available data
39
bam
34
bigWig
31
bed narrowPeak
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
20
bed bed3+
2
hic
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
tar
1
tsv
Organism
11
Homo sapiens
Biosample type
10
primary cell
1
tissue
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
0
ureter
Project
11
AMP
Genome assembly (visualization)
6
hg19
1
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
RRBS
total RNA-seq
primary cell
endothelial cell of umbilical vein
7
2
pericardium fibroblast
1
tissue
pericardium
1
Download