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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
RNA microarray
1
snATAC-seq
Assay category
6
DNA binding
1
DNA accessibility
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
control
Date released
6
August, 2017
1
April, 2020
1
August, 2021
Available data
6
bam
6
bed broadPeak
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
6
fastq
6
tagAlign
Organism
Homo sapiens
Biosample type
8
tissue
4
cell line
2
stem cell
Organ
6
pancreas
1
adipose tissue
1
connective tissue
1
lung
Project
7
AMP
1
LungMap
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
7
AMP-T2D consortium
1
Xin Sun, UCSD
Audit category:
1
inconsistent assembly
replicates.library.biosample.donor.organism.scientific_name!
Homo sapiens
target.investigated_as!
control
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
RNA microarray
snATAC-seq
tissue
pancreas
6
lung
1
subcutaneous adipose tissue
1
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